pygmtools.numpy_backend

Functions

build_batch	numpy implementation of building a batched np.ndarray
dense_to_sparse	numpy implementation of converting a dense adjacency matrix to a sparse matrix
from_numpy	identity function
gaussian_aff_fn	numpy implementation of Gaussian affinity function
hungarian	numpy implementation of Hungarian algorithm
inner_prod_aff_fn	numpy implementation of inner product affinity function
ipfp	numpy implementation of IPFP algorithm
rrwm	numpy implementation of RRWM algorithm.
sinkhorn	numpy implementation of Sinkhorn algorithm
sm	numpy implementation of SM algorithm.
to_numpy	identity function